TAP RWP-RK in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

RWP-RK

(Domain names are clickable)



List of proteins (23)

hide all | show all
namename additionClick button to show/hide sequence: Download sequence?
c0_seq11_1[1 - 1416] len=1596 path=[16186:0-86 17011:87-90 2327:91-1117 3354:1118-1297 17037:1298-1298 15825:1299-1595]
c0_seq13_1[172 - 498] len=678 path=[13997:0-199 3354:200-379 17037:380-380 15825:381-677]
c0_seq1_3[3 - 4940] len=5400 path=[14:0-487 502:488-591 606:592-1571 1586:1572-1988 2003:1989-2308 17011:2309-2312 2327:2313-3339 3354:3340-3519 17037:3520-3520 3535:3521-5362 5377:5363-5399]
c0_seq2_4[442 - 4836] len=5296 path=[14:0-487 606:488-1467 1586:1468-1884 2003:1885-2204 17011:2205-2208 2327:2209-3235 3354:3236-3415 17037:3416-3416 3535:3417-5258 5377:5259-5295]
c0_seq3_3[3 - 3638] len=3818 path=[14:0-487 502:488-591 606:592-1571 1586:1572-1988 2003:1989-2308 17011:2309-2312 2327:2313-3339 3354:3340-3519 17037:3520-3520 15825:3521-3817]
c0_seq4_4[442 - 3534] len=3714 path=[14:0-487 606:488-1467 1586:1468-1884 2003:1885-2204 17011:2205-2208 2327:2209-3235 3354:3236-3415 17037:3416-3416 15825:3417-3713]
c0_seq5_1[1 - 2718] len=3178 path=[16186:0-86 17011:87-90 2327:91-1117 3354:1118-1297 17037:1298-1298 3535:1299-3140 5377:3141-3177]
c3_seq3_4[490 - 1863] len=1887 path=[9557:0-690 10248:691-1351 6947:1352-1454 7050:1455-1886]
c3_seq4_4[490 - 1464] len=1784 path=[9557:0-690 10248:691-1351 7050:1352-1783]
c0_seq1_3_rccomp119083_c0_seq1_3 [1260 - 1] (REVERSE SENSE) len=1620 path=[1:0-1619]
c0_seq2_3_rccomp4232_c0_seq2_3 [785 - 315] (REVERSE SENSE) len=1029 path=[1:0-517 519:518-1028]
c0_seq1_6_rccomp6211_c0_seq1_6 [2414 - 726] (REVERSE SENSE) len=2478 path=[1:0-593 4618:594-751 595:752-895 739:896-2235 2079:2236-2477]
c0_seq2_4_rccomp6211_c0_seq2_4 [2243 - 726] (REVERSE SENSE) len=2467 path=[1:0-593 4618:594-751 595:752-895 739:896-2235 5259:2236-2466]
c0_seq3_6_rccomp6211_c0_seq3_6 [2256 - 379] (REVERSE SENSE) len=2320 path=[1:0-593 595:594-737 739:738-2077 2079:2078-2319]
c0_seq4_4_rccomp6211_c0_seq4_4 [2085 - 379] (REVERSE SENSE) len=2309 path=[1:0-593 595:594-737 739:738-2077 5259:2078-2308]
c0_seq1_7_rccomp7099_c0_seq1_7 [1877 - 210] (REVERSE SENSE) len=1908 path=[1886:0-556 2443:557-1467 3354:1468-1469 3356:1470-1907]
c0_seq1_3[533 - 1249] len=2214 path=[2190:0-254 2445:255-636 2827:637-771 2962:772-772 2963:773-977 3168:978-1115 4437:1116-1116 3306:1117-1581 4714:1582-1582 3771:1583-2213]
c0_seq2_3[574 - 1113] len=2078 path=[2190:0-254 2445:255-636 2963:637-841 3168:842-979 4437:980-980 3306:981-1445 4714:1446-1446 3771:1447-2077]
c0_seq3_2[88 - 732] len=1697 path=[2190:0-254 2962:255-255 2963:256-460 3168:461-598 4437:599-599 3306:600-1064 4714:1065-1065 3771:1066-1696]
c0_seq6_1[88 - 462] len=560 path=[2190:0-254 2962:255-255 2963:256-460 4522:461-559]
c0_seq1_3[118 - 2274] len=2538 path=[1:0-144 146:145-159 161:160-1280 1282:1281-1938 1940:1939-2537]
c0_seq2_3[118 - 2259] len=2523 path=[1:0-144 161:145-1265 1282:1266-1923 1940:1924-2522]
c0_seq3_1[80 - 1081] len=1345 path=[5293:0-87 1282:88-745 1940:746-1344]
select all | unselect

A list of species letter codes included in the protein names can be found here (opens in new tab).

↑ back to top


¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum